Uses of Class
uk.ac.ebi.intenz.domain.enzyme.EnzymeName

Packages that use EnzymeName

Package	Description
uk.ac.ebi.intenz.domain.enzyme	The core enzyme information is held in these classes.

Uses of EnzymeName in uk.ac.ebi.intenz.domain.enzyme

Fields in uk.ac.ebi.intenz.domain.enzyme declared as EnzymeName

Modifier and Type	Field and Description
static EnzymeName	EnzymeName.UNDEF

Methods in uk.ac.ebi.intenz.domain.enzyme that return EnzymeName

Modifier and Type	Method and Description
EnzymeName	EnzymeEntry.getCommonName()
EnzymeName	EnzymeEntry.getCommonName(EnzymeViewConstant view) Returns the first common name which view value matches the parameter's view value.
static EnzymeName	EnzymeName.getCommonNameInstance(String name, EnzymeSourceConstant source, EnzymeViewConstant view) Returns an EnzymeName instance representing an enzyme's common (recommended) name.
static EnzymeName	EnzymeName.getSynonymInstance(String name, EnzymeNameQualifierConstant qualifier, EnzymeSourceConstant source, EnzymeViewConstant view) Returns an EnzymeName instance representing an enzyme's synonym.
EnzymeName	EnzymeEntry.getSystematicName()
static EnzymeName	EnzymeName.getSystematicNameInstance(String name, EnzymeSourceConstant source, EnzymeViewConstant view) Returns an EnzymeName instance representing an enzyme's systematic name.
static EnzymeName	EnzymeName.valueOf(String name, EnzymeNameTypeConstant type, EnzymeNameQualifierConstant qualifier, EnzymeSourceConstant source, EnzymeViewConstant view)

Methods in uk.ac.ebi.intenz.domain.enzyme that return types with arguments of type EnzymeName

Modifier and Type	Method and Description
List<EnzymeName>	EnzymeEntry.getCommonNames()
List<EnzymeName>	EnzymeEntry.getSynonyms()
List<EnzymeName>	EnzymeEntry.getSynonyms(EnzymeViewConstant view) Deprecated. use EnzymeEntry.getSynonyms(String) or EnzymeEntry.getSynonyms(View) instead.
List<EnzymeName>	EnzymeEntry.getSynonyms(String view)
List<EnzymeName>	EnzymeEntry.getSynonyms(View theView)

Methods in uk.ac.ebi.intenz.domain.enzyme with parameters of type EnzymeName

Modifier and Type	Method and Description
void	EnzymeEntry.addCommonName(EnzymeName commonName) Adds a common name to the list of common names.
void	EnzymeEntry.addSynonym(EnzymeName synonym) Adds a synonsm to the list of synonyms.
int	EnzymeName.compareTo(EnzymeName name)
void	EnzymeEntry.setSystematicName(EnzymeName systematicName) Sets the systematic name of the enzyme.

Method parameters in uk.ac.ebi.intenz.domain.enzyme with type arguments of type EnzymeName

Modifier and Type	Method and Description
void	EnzymeEntry.setCommonNames(List<EnzymeName> commonNames) Sets the list of common names.
void	EnzymeEntry.setSynonyms(List<EnzymeName> synonyms) Sets the list of synonyms.