compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

runtime

The following is a list of runtime dependencies for this project. These dependencies are required to run the application:

compile

The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:

Dependency Tree

• uk.ac.ebi.intenz:intenz-import:jar:1.0.12

  IntEnz import module
  Description: Module to import external cross references URL: http://intenz.sf.net/intenz-import Project License: The Apache Software License, Version 2.0

  • log4j:log4j:jar:1.2.17 (compile)

    Apache Log4j
    Description: Apache Log4j 1.2 URL: http://logging.apache.org/log4j/1.2/ Project License: The Apache Software License, Version 2.0

  • uk.ac.ebi.intenz:intenz-mapper:jar:4.6.0 (compile)

    IntEnz mapper module
    Description: IntEnz - Mapper package URL: http://intenz.sf.net/intenz-mapper Project License: The Apache Software License, Version 2.0

    • uk.ac.ebi.intenz:intenz-core:jar:4.3.3 (compile)

      IntEnz core module
      Description: IntEnz - Core package URL: http://intenz.sf.net/intenz-core Project License: The Apache Software License, Version 2.0

      • uk.ac.ebi.xchars:xchars:jar:1.2.6 (compile)

        XChars Java package
        Description: Java package for Special Characters handling. URL: http://intenz.sf.net/xchars/core Project License: No license is defined for this project.

      • uk.ac.ebi.xchars:xchars-config:jar:1.0.3 (compile)

        XChars configuration
        Description: Allows encoding/decoding of Special Characters. URL: http://intenz.sf.net/xchars/config Project License: No license is defined for this project.

      • uk.ac.ebi.biobabel:biobabel-core:jar:0.13 (compile)

        Core Utility Modules
        Description: The Biobabel Utility Core Modules. URL: http://intenz.sf.net/biobabel/biobabel-core Project License: No license is defined for this project.

    • uk.ac.ebi.rhea:rhea-mapper:jar:3.8.0 (compile)

      Mapper
      Description: Interfaces for mapping domain objects to a data source. Implementations for JDBC and web service are included. URL: http://rhea-ebi.sf.net/rhea-mapper Project License: The Apache Software License, Version 2.0

      • commons-lang:commons-lang:jar:2.6 (compile)

        Commons Lang
        Description: Commons Lang, a package of Java utility classes for the classes that are in java.lang's hierarchy, or are considered to be so standard as to justify existence in java.lang. URL: http://commons.apache.org/lang/ Project License: The Apache Software License, Version 2.0

      • uk.ac.ebi.biobabel:biobabel-citations:jar:2.0.1 (compile)

        Citations utilities
        Description: A module to handle citations from CiteXplore. URL: http://intenz.sf.net/biobabel/biobabel-citations Project License: No license is defined for this project.

        • com.sun.xml.ws:jaxws-tools:jar:2.1.4 (compile)

          JAX-WS (JSR-224) Reference Implementation Tools
          Description: Open source Reference Implementation of JSR-224: Java API for XML Web Services URL: https://jax-ws.dev.java.net// Project License: COMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0GPLv2 with classpath exception

          • com.sun.xml.ws:jaxws-rt:jar:2.1.4 (compile)

            JAX-WS (JSR-224) Reference Implementation
            Description: Open source Reference Implementation of JSR-224: Java API for XML Web Services URL: https://jax-ws.dev.java.net// Project License: COMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0GPLv2 with classpath exception

            • com.sun.xml.bind:jaxb-impl:jar:2.1.7 (compile)

              jaxb-impl
              Description: There is currently no description associated with this project. Project License: No license is defined for this project.

            • com.sun.xml.stream.buffer:streambuffer:jar:0.7 (compile)

              streambuffer
              Description: There is currently no description associated with this project. Project License: No license is defined for this project.

            • com.sun.xml.stream:sjsxp:jar:1.0.1 (compile)

              sjsxp
              Description: There is currently no description associated with this project. Project License: No license is defined for this project.

            • org.jvnet.staxex:stax-ex:jar:1.2 (compile)

              Extended StAX API
              Description: Extensions to JSR-173 StAX API. URL: https://stax-ex.dev.java.net/ Project License: Common Development And Distribution License (CDDL) Version 1.0

            • com.sun.org.apache.xml.internal:resolver:jar:20050927 (compile)

              resolver
              Description: There is currently no description associated with this project. Project License: No license is defined for this project.

            • org.jvnet:mimepull:jar:1.2 (compile)

              MIME streaming extension
              Description: Provides a streaming API to access attachments parts in a MIME message. Project License: COMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0GPLv2 with classpath exception

          • com.sun.xml.bind:jaxb-xjc:jar:2.1.7 (compile)

            jaxb-xjc
            Description: There is currently no description associated with this project. Project License: No license is defined for this project.

        • javax.xml.bind:jaxb-api:jar:2.1 (compile)

          jaxb-api
          Description: There is currently no description associated with this project. Project License: No license is defined for this project.

          • javax.xml.stream:stax-api:jar:1.0-2 (compile)

            Streaming API for XML
            Description: StAX is a standard XML processing API that allows you to stream XML data from and to your application. Project License: GNU General Public LibraryCOMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0

          • javax.activation:activation:jar:1.1 (compile)

            JavaBeans Activation Framework (JAF)

            Description: JavaBeans Activation Framework (JAF) is a standard extension to the Java platform that lets you take advantage of standard services to: determine the type of an arbitrary piece of data; encapsulate access to it; discover the operations available on it; and instantiate the appropriate bean to perform the operation(s). URL: http://java.sun.com/products/javabeans/jaf/index.jsp Project License: Common Development and Distribution License (CDDL) v1.0

        • javax.xml.ws:jaxws-api:jar:2.1-1 (compile)

          jaxws-api
          Description: There is currently no description associated with this project. Project License: No license is defined for this project.

      • org.apache.lucene:lucene-core:jar:3.0.2 (compile)

        Lucene Core
        Description: Apache Lucene Java Core URL: http://lucene.apache.org/java/lucene-core Project License: Apache 2

      • uk.ac.ebi.biobabel:biobabel-lucene:jar:1.0.6 (compile)

        Lucene module
        Description: Biobabel utilities for Lucene. URL: http://intenz.sf.net/biobabel/biobabel-lucene Project License: No license is defined for this project.

      • uk.ac.ebi.chebi.utilities.structure.transformer:chebi-structure-transformer:jar:1.4.2 (compile)

        ChEBI Structures Transformer
        Description: There is currently no description associated with this project. URL: /chebi-prg/chebi-utilities/chebi-structure/chebi-structure-transformer Project License: No license is defined for this project.

        • uk.ac.ebi.chebi.model:chebi-model:jar:1.7 (compile)

          ChEBI Domain Model
          Description: ChEBI domain model URL: /chebi-prg/chebi-model Project License: No license is defined for this project.

        • chemaxon.marvin:MarvinBeans:jar:5.1.0 (compile)

          MarvinBeans
          Description: There is currently no description associated with this project. Project License: No license is defined for this project.

      • uk.ac.ebi.chebi.webapps.chebiWS.client:chebiWS-client:jar:2.0 (compile)

        ChEBI Public Web Services Client
        Description: The public Web Services client mostly auto-generated from JAX-WS. Project License: No license is defined for this project.

        • com.sun.xml.messaging.saaj:saaj-impl:jar:1.3.2 (compile)

          saaj-impl
          Description: There is currently no description associated with this project. Project License: No license is defined for this project.

          • javax.xml.soap:saaj-api:jar:1.3 (compile)

            SOAP with Attachments API Package
            Description: There is currently no description associated with this project. URL: http://java.sun.com/webservices/saaj/index.jsp Project License: COMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0

    • uk.ac.ebi.rhea:rhea-domain:jar:1.8.0 (compile)

      Domain model
      Description: The domain model of Rhea. URL: http://rhea-ebi.sf.net/rhea-domain Project License: Creative Commons Attribution (CC BY) 3.0

      • uk.ac.ebi.xchars:xchars-taglib:jar:1.0.2 (compile)

        XChars tag library
        Description: Tag library to make special characters transformations from JSPs. URL: http://intenz.sf.net/xchars/taglib Project License: No license is defined for this project.

    • commons-collections:commons-collections:jar:3.2.1 (compile)

      Commons Collections
      Description: Types that extend and augment the Java Collections Framework. URL: http://commons.apache.org/collections/ Project License: The Apache Software License, Version 2.0

  • uk.ac.ebi.uniprot.kraken:uniprotjapi:jar:2014.07 (compile)

    UniProtJAPI
    Description: There is currently no description associated with this project. Project License: No license is defined for this project.

    • org.springframework:spring-aop:jar:3.0.5.RELEASE (compile)

      spring-aop
      Description: Spring Framework Parent Project License: No license is defined for this project.

      • org.springframework:spring-asm:jar:3.0.5.RELEASE (compile)

        spring-asm
        Description: Spring Framework Parent Project License: No license is defined for this project.

    • org.springframework:spring-beans:jar:3.0.5.RELEASE (compile)

      spring-beans
      Description: Spring Framework Parent Project License: No license is defined for this project.

    • org.springframework:spring-context:jar:3.0.5.RELEASE (compile)

      spring-context
      Description: Spring Framework Parent Project License: No license is defined for this project.

      • org.springframework:spring-expression:jar:3.0.5.RELEASE (compile)

        spring-expression
        Description: Spring Framework Parent Project License: No license is defined for this project.

    • org.springframework:spring-core:jar:3.0.5.RELEASE (compile)

      spring-core
      Description: Spring Framework Parent Project License: No license is defined for this project.

    • org.springframework:spring-web:jar:3.0.5.RELEASE (compile)

      spring-web
      Description: Spring Framework Parent Project License: No license is defined for this project.

    • commons-codec:commons-codec:jar:1.3 (compile)

      Codec
      Description: The codec package contains simple encoder and decoders for various formats such as Base64 and Hexadecimal. In addition to these widely used encoders and decoders, the codec package also maintains a collection of phonetic encoding utilities. URL: http://jakarta.apache.org/commons/codec/ Project License: The Apache Software License, Version 2.0

    • commons-httpclient:commons-httpclient:jar:3.0.1 (compile)

      HttpClient
      Description: The HttpClient component supports the client-side of RFC 1945 (HTTP/1.0) and RFC 2616 (HTTP/1.1) , several related specifications (RFC 2109 (Cookies) , RFC 2617 (HTTP Authentication) , etc.), and provides a framework by which new request types (methods) or HTTP extensions can be created easily. URL: http://jakarta.apache.org/commons/httpclient/ Project License: Apache License

      • junit:junit:jar:3.8.1 (compile)

        JUnit
        Description: JUnit is a regression testing framework written by Erich Gamma and Kent Beck. It is used by the developer who implements unit tests in Java. URL: http://junit.org Project License: Common Public License Version 1.0

    • commons-logging:commons-logging:jar:1.0.4 (compile)

      Logging
      Description: Commons Logging is a thin adapter allowing configurable bridging to other, well known logging systems. URL: http://jakarta.apache.org/commons/logging/ Project License: The Apache Software License, Version 2.0

    • aopalliance:aopalliance:jar:1.0 (compile)

      AOP alliance
      Description: AOP Alliance URL: http://aopalliance.sourceforge.net Project License: Public Domain

  • uk.ac.ebi.biobabel:biobabel-db:jar:1.3.7 (compile)

    Database utilities
    Description: A module with database utilities. URL: http://intenz.sf.net/biobabel/biobabel-db Project License: No license is defined for this project.

    • org.antlr:antlr:jar:3.0.1 (compile)

      AntLR Parser Generator
      Description: A framework for constructing recognizers, compilers, and translators from grammatical descriptions containing Java, C#, C++, or Python actions. URL: http://antlr.org/ Project License: BSD licence

      • org.antlr:stringtemplate:jar:3.1-b1 (compile)

        StringTemplate Template Engine
        Description: StringTemplate is a java template engine (with ports for C# and Python) for generating source code, web pages, emails, or any other formatted text output. URL: http://www.stringtemplate.org Project License: BSD licence

      • antlr:antlr:jar:2.7.7 (compile)

        AntLR Parser Generator
        Description: A framework for constructing recognizers, compilers, and translators from grammatical descriptions containing Java, C#, C++, or Python actions. URL: http://www.antlr.org/ Project License: BSD License

  • com.oracle:ojdbc5:jar:11.1.0.7.0 (runtime)

    ojdbc5
    Description: There is currently no description associated with this project. Project License: No license is defined for this project.