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createImporter(String) - Static method in class uk.ac.ebi.intenz.tools.importer.ImporterFactory

D

destroy() - Method in class uk.ac.ebi.intenz.tools.importer.GoLinkImporter

Close database connections.

destroy() - Method in class uk.ac.ebi.intenz.tools.importer.Importer

Method used to close all loose ends.

destroy() - Method in class uk.ac.ebi.intenz.tools.importer.KrakenLinkImporter

doImport() - Method in class uk.ac.ebi.intenz.tools.importer.Importer

Using the template pattern to do the import.

G

getKrakenLinks(String) - Method in class uk.ac.ebi.intenz.tools.importer.KrakenLinkImporter

GO_IMPORTER - Static variable in class uk.ac.ebi.intenz.tools.importer.ImporterFactory

GoLinkImporter - Class in uk.ac.ebi.intenz.tools.importer

Describe class GoLinkImporter here.

GoLinkImporter() - Constructor for class uk.ac.ebi.intenz.tools.importer.GoLinkImporter

I

ImportController - Class in uk.ac.ebi.intenz.tools.importer

ImportController used to run the importers.

ImportController() - Constructor for class uk.ac.ebi.intenz.tools.importer.ImportController

importData() - Method in class uk.ac.ebi.intenz.tools.importer.GoLinkImporter

Gets the list of enzyme entries and the updated GO links.

importData() - Method in class uk.ac.ebi.intenz.tools.importer.Importer

Used to import the data from the source

importData() - Method in class uk.ac.ebi.intenz.tools.importer.KrakenLinkImporter

Importer - Class in uk.ac.ebi.intenz.tools.importer

This interface defines the imported for all data.

Importer() - Constructor for class uk.ac.ebi.intenz.tools.importer.Importer

ImporterFactory - Class in uk.ac.ebi.intenz.tools.importer

This class, is used to create instances of the importers.

ImporterFactory() - Constructor for class uk.ac.ebi.intenz.tools.importer.ImporterFactory

importerProps - Variable in class uk.ac.ebi.intenz.tools.importer.Importer

K

KRAKEN_IMPORTER - Static variable in class uk.ac.ebi.intenz.tools.importer.ImporterFactory

KrakenLinkImporter - Class in uk.ac.ebi.intenz.tools.importer

KrakenLinkImporter() - Constructor for class uk.ac.ebi.intenz.tools.importer.KrakenLinkImporter

L

loadData() - Method in class uk.ac.ebi.intenz.tools.importer.GoLinkImporter

Write imported GO links to the database.

loadData() - Method in class uk.ac.ebi.intenz.tools.importer.Importer

Method called after the data has been imported succesfully.

loadData() - Method in class uk.ac.ebi.intenz.tools.importer.KrakenLinkImporter

M

main(String[]) - Static method in class uk.ac.ebi.intenz.tools.importer.ImportController

Imports links from external databases.

S

setup() - Method in class uk.ac.ebi.intenz.tools.importer.GoLinkImporter

Open database connections.

setup() - Method in class uk.ac.ebi.intenz.tools.importer.Importer

Used to setup all network connections.

setup() - Method in class uk.ac.ebi.intenz.tools.importer.KrakenLinkImporter

setupKraken() - Method in class uk.ac.ebi.intenz.tools.importer.KrakenLinkImporter

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uk.ac.ebi.intenz.tools.importer - package uk.ac.ebi.intenz.tools.importer

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