| Version | Date | Description |
|---|---|---|
| 4.3.3 | 2014-04-28 | New Rhea model |
| 4.3.2 | 2013-06-04 | Database links fixed, sorted and added. |
| 4.3.1 | 2013-05-28 | Removed ERGO links; dependency updates |
| 4.3.0 | 2012-11-30 | IUBMB flags |
| 4.2.9 | 2012-09-07 | Updated ENZYME URL. |
| 4.2.8 | 2012-06-13 | Updated UMBBD URL. |
| 4.2.7 | 2012-05-22 | Removing IUBMB view. |
| 4.2.6 | 2011-07-05 | Bug fix |
| 4.2.5 | 2011-03-17 | Dependency updates |
| 4.2.4 | 2010-03-30 | Bug fix |
| 4.2.3 | 2010-03-03 | Added ERGO to automatic links |
| 4.2.2 | 2009-10-07 | Fixed automatic links |
| 4.2.1 | 2009-10-02 | EC and enzyme comparisons |
| 4.2 | 2009-09-29 | Preliminary EC numbers. |
| 4.1 | 2009-05-07 | Refactoring |
| 4.0.4 | 2008-07-07 | |
| 4.0.3 | 2008-05-30 | |
| 4.0.2 | 2008-04-22 | |
| 4.0.1 | 2008-04-15 | Fixed URL |
| Type | Changes | By |
|---|---|---|
 | Updated to latest version of rhea-domain (new data model). | rafalcan |
| Type | Changes | By |
|---|---|---|
 | Fixed order of links: first enzyme nomenclature (NC-IUBMB and then others alphabetically), then structural data (CSA, PDB), then CAS. | rafalcan |
| Fixed MetaCyc and CSA base URLs. | rafalcan |
 | Added links to UniPathway and ExplorEnz. | rafalcan |
| Updated to latest version of intenz-ffwriter. | rafalcan |
| Type | Changes | By |
|---|---|---|
 | Removed automatic links to ERGO, as the website does not exist any longer. | rafalcan |
| Updated to latest version of parent, biobabel-core, commons-collections and junit. | rafalca |
| Type | Changes | By |
|---|---|---|
| Added IUBMB flag to enzyme-(Rhea)reaction relationships. | rafalcan |
| EnzymaticReactions now implements Collection. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Changed URL of ENZYME links to the new ones (http://enzyme.expasy.org/EC/). | rafalcan |
| Obsolete Rhea reactions are now ignored (only accepted or preliminary ones are shown). | rafalcan |
| Updated to latest version of rhea-domain. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Changed URL of UMBBD links to the new ones (umbbd.ethz.ch). | rafalcan |
| Type | Changes | By |
|---|---|---|
| Removed IUBMB view from EnzymeLink's. | rafalcan |
| Updated to latest rhea-domain version. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Fixed parsing of EC numbers with asterisks or dash. | rafalcan |
| Updated to latest rhea-domain version. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Updated to latest parent, rhea-domain, xchars and biobabel-core versions. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Fixed NPE thrown while adding reactions to an EnzymaticReactions object. | rafalcan |
| Updated to latest rhea-domain version (decompositions). | rafalcan |
| Type | Changes | By |
|---|---|---|
| Added ERGO to the list of automatic links. | rafalcan |
| Updated to latest biobabel-core and rhea-domain versions. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Fixed automatic links: preliminary EC numbers will only have one to ENZYME in INTENZ view. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Fixed EnzymeCommissionNumber.compare method in order to take into account preliminary EC numbers. | rafalcan |
| Added comparators for enzyme entries based on EC number and common name. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Added implementation for preliminary EC numbers. | rafalcan |
| Added MetaCyc as xref for enzymes (to their preliminary EC numbers). | rafalcan |
| Fixed XrefDatabaseConstant.BRENDA, now considered as xref (to their preliminary EC numbers). | rafalcan |
| Updated to latest rhea-domain and biobabel-core (updated validator with support for preliminary EC numbers). | rafalcan |
| Obsolete class DataComment is not used any longer. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Added enumerations to replace constant classes. | rafalcan |
| Added methods to use the new enumerations. | rafalcan |
| Refactored some getter methods. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Fixed UniProt URL for their new website. | rafalcan |
| Updated to latest xchars modules. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Updated to latest rhea.domain module to fix problems related to MetaCyc xrefs in reactions, reflecting in IntEnz curator tool. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Updated to last rhea.domain (for reaction Source class refactoring) and xchars-config (for ý character) versions. | rafalcan |
| Moved biopax code to its own module, as it is not mandatory for the curator application. | rafalcan |
| Type | Changes | By |
|---|---|---|
| Changed old BRENDA URL with the new one (www.brenda-enzymes.info). | rafalcan |
