Parent Project
IntEnz database
Project Documentation
The following document contains the results of Checkstyle. 
| Rules | Violations | Severity |
|---|---|---|
JavadocPackage
| 2 |  Error |
| NewlineAtEndOfFile | 1 | Error |
| Translation | 0 | Error |
| FileLength | 0 | Error |
FileTabCharacter
| 157 | Error |
RegexpSingleline
| 48 | Error |
| JavadocMethod | 25 | Error |
| JavadocType | 1 | Error |
| JavadocVariable | 14 | Error |
| JavadocStyle | 0 | Error |
| ConstantName | 0 | Error |
| LocalFinalVariableName | 0 | Error |
| LocalVariableName | 0 | Error |
| MemberName | 0 | Error |
| MethodName | 0 | Error |
| PackageName | 0 | Error |
| ParameterName | 0 | Error |
| StaticVariableName | 0 | Error |
| TypeName | 0 | Error |
| AvoidStarImport | 0 | Error |
| IllegalImport | 0 | Error |
| RedundantImport | 0 | Error |
| UnusedImports | 0 | Error |
| LineLength | 27 | Error |
| MethodLength | 0 | Error |
| ParameterNumber | 0 | Error |
| EmptyForIteratorPad | 0 | Error |
| MethodParamPad | 0 | Error |
| NoWhitespaceAfter | 0 | Error |
| NoWhitespaceBefore | 0 | Error |
| OperatorWrap | 0 | Error |
| ParenPad | 0 | Error |
| TypecastParenPad | 0 | Error |
| WhitespaceAfter | 0 | Error |
| WhitespaceAround | 9 | Error |
| ModifierOrder | 0 | Error |
| RedundantModifier | 9 | Error |
| AvoidNestedBlocks | 0 | Error |
| EmptyBlock | 0 | Error |
| LeftCurly | 0 | Error |
| NeedBraces | 7 | Error |
| RightCurly | 0 | Error |
| AvoidInlineConditionals | 0 | Error |
| EmptyStatement | 0 | Error |
| EqualsHashCode | 0 | Error |
| HiddenField | 2 | Error |
| IllegalInstantiation | 0 | Error |
| InnerAssignment | 0 | Error |
| MagicNumber | 0 | Error |
| MissingSwitchDefault | 0 | Error |
| RedundantThrows | 0 | Error |
| SimplifyBooleanExpression | 0 | Error |
| SimplifyBooleanReturn | 0 | Error |
| DesignForExtension | 13 | Error |
| FinalClass | 0 | Error |
| HideUtilityClassConstructor | 1 | Error |
| InterfaceIsType | 0 | Error |
| VisibilityModifier | 0 | Error |
| ArrayTypeStyle | 1 | Error |
| FinalParameters | 9 | Error |
| TodoComment | 0 | Error |
| UpperEll | 0 | Error |
| Violation | Message | Line |
|---|---|---|
| Missing package-info.java file. | 0 |
| Line contains a tab character. | 16 |
| Missing a Javadoc comment. | 16 |
| Redundant 'public' modifier. | 16 |
| Line has trailing spaces. | 17 |
| Line contains a tab character. | 17 |
| Line contains a tab character. | 18 |
| Missing a Javadoc comment. | 18 |
| Redundant 'public' modifier. | 18 |
| Line has trailing spaces. | 19 |
| Line contains a tab character. | 19 |
| Line contains a tab character. | 20 |
| Missing a Javadoc comment. | 20 |
| Redundant 'public' modifier. | 20 |
| Line has trailing spaces. | 21 |
| Line contains a tab character. | 21 |
| Line contains a tab character. | 22 |
| Missing a Javadoc comment. | 22 |
| Redundant 'public' modifier. | 22 |
| Line has trailing spaces. | 23 |
| Line contains a tab character. | 23 |
| Line contains a tab character. | 24 |
| Missing a Javadoc comment. | 24 |
| Redundant 'public' modifier. | 24 |
| Line has trailing spaces. | 25 |
| Line contains a tab character. | 25 |
| Line contains a tab character. | 26 |
| Line contains a tab character. | 27 |
| Line is longer than 80 characters (found 81). | 28 |
| Line contains a tab character. | 28 |
| Line contains a tab character. | 29 |
| Line contains a tab character. | 30 |
| Line contains a tab character. | 31 |
| Redundant 'public' modifier. | 31 |
| Line has trailing spaces. | 32 |
| Line contains a tab character. | 32 |
| Line contains a tab character. | 33 |
| Missing a Javadoc comment. | 33 |
| Redundant 'public' modifier. | 33 |
| Line has trailing spaces. | 34 |
| Line contains a tab character. | 34 |
| Line contains a tab character. | 35 |
| Missing a Javadoc comment. | 35 |
| Redundant 'public' modifier. | 35 |
| Line has trailing spaces. | 36 |
| Line contains a tab character. | 36 |
| Line contains a tab character. | 37 |
| Missing a Javadoc comment. | 37 |
| Redundant 'public' modifier. | 37 |
| Violation | Message | Line |
|---|---|---|
| Missing package-info.java file. | 0 |
| Line contains a tab character. | 26 |
| Missing a Javadoc comment. | 26 |
| Line contains a tab character. | 27 |
| Missing a Javadoc comment. | 27 |
| Line contains a tab character. | 29 |
| Missing a Javadoc comment. | 29 |
| Line contains a tab character. | 30 |
| Missing a Javadoc comment. | 30 |
| Line contains a tab character. | 31 |
| Missing a Javadoc comment. | 31 |
| Line contains a tab character. | 32 |
| Missing a Javadoc comment. | 32 |
| Line contains a tab character. | 33 |
| Missing a Javadoc comment. | 33 |
| Line contains a tab character. | 34 |
| Missing a Javadoc comment. | 34 |
| Line contains a tab character. | 35 |
| Missing a Javadoc comment. | 35 |
| Line has trailing spaces. | 36 |
| Line contains a tab character. | 36 |
| Line contains a tab character. | 37 |
| Missing a Javadoc comment. | 37 |
| Missing a Javadoc comment. | 38 |
| Line contains a tab character. | 40 |
| Method 'getReleaseNumber' is not designed for extension - needs to be abstract, final or empty. | 40 |
| Missing a Javadoc comment. | 40 |
| Line contains a tab character. | 41 |
| Line contains a tab character. | 42 |
| Line contains a tab character. | 44 |
| Method 'getReleaseDate' is not designed for extension - needs to be abstract, final or empty. | 44 |
| Missing a Javadoc comment. | 44 |
| Line contains a tab character. | 45 |
| Line contains a tab character. | 46 |
| Line contains a tab character. | 48 |
| Method 'getClasses' is not designed for extension - needs to be abstract, final or empty. | 48 |
| Missing a Javadoc comment. | 48 |
| Line contains a tab character. | 49 |
| Line contains a tab character. | 50 |
| Line contains a tab character. | 52 |
| Method 'getSubclasses' is not designed for extension - needs to be abstract, final or empty. | 52 |
| Missing a Javadoc comment. | 52 |
| Line contains a tab character. | 53 |
| Line contains a tab character. | 54 |
| Line contains a tab character. | 56 |
| Method 'getSubSubclasses' is not designed for extension - needs to be abstract, final or empty. | 56 |
| Missing a Javadoc comment. | 56 |
| Line contains a tab character. | 57 |
| Line contains a tab character. | 58 |
| Line contains a tab character. | 60 |
| Method 'getEnzymesByStatus' is not designed for extension - needs to be abstract, final or empty. | 60 |
| Missing a Javadoc comment. | 60 |
| Line contains a tab character. | 61 |
| Line contains a tab character. | 62 |
| Line contains a tab character. | 64 |
| Method 'getSynonyms' is not designed for extension - needs to be abstract, final or empty. | 64 |
| Missing a Javadoc comment. | 64 |
| Line contains a tab character. | 65 |
| Line contains a tab character. | 66 |
| Line contains a tab character. | 68 |
| Method 'getXrefs' is not designed for extension - needs to be abstract, final or empty. | 68 |
| Missing a Javadoc comment. | 68 |
| Line contains a tab character. | 69 |
| Line contains a tab character. | 70 |
| Line contains a tab character. | 72 |
| Method 'getLinks' is not designed for extension - needs to be abstract, final or empty. | 72 |
| Missing a Javadoc comment. | 72 |
| Line contains a tab character. | 73 |
| Line contains a tab character. | 74 |
| Line contains a tab character. | 76 |
| Missing a Javadoc comment. | 76 |
| Parameter con should be final. | 76 |
| Line contains a tab character. | 77 |
| '{' is not preceded with whitespace. | 77 |
| Line contains a tab character. | 78 |
| Line contains a tab character. | 79 |
| Line contains a tab character. | 80 |
| Line is longer than 80 characters (found 84). | 82 |
| Line contains a tab character. | 82 |
| Method 'setConnection' is not designed for extension - needs to be abstract, final or empty. | 82 |
| Missing a Javadoc comment. | 82 |
| Parameter con should be final. | 82 |
| 'if' construct must use '{}'s. | 83 |
| Line contains a tab character. | 83 |
| Line contains a tab character. | 84 |
| Line contains a tab character. | 86 |
| Line contains a tab character. | 88 |
| Method 'updateStatistics' is not designed for extension - needs to be abstract, final or empty. | 88 |
| Missing a Javadoc comment. | 88 |
| Line contains a tab character. | 89 |
| Line contains a tab character. | 90 |
| Line has trailing spaces. | 91 |
| Line contains a tab character. | 91 |
| Line contains a tab character. | 92 |
| Line contains a tab character. | 93 |
| Line contains a tab character. | 94 |
| '{' is not preceded with whitespace. | 94 |
| Line contains a tab character. | 95 |
| Line contains a tab character. | 96 |
| Line contains a tab character. | 97 |
| Line has trailing spaces. | 98 |
| Line contains a tab character. | 98 |
| Line contains a tab character. | 99 |
| Line contains a tab character. | 100 |
| 'if' construct must use '{}'s. | 101 |
| Line contains a tab character. | 101 |
| Line contains a tab character. | 103 |
| Line contains a tab character. | 104 |
| 'if' construct must use '{}'s. | 105 |
| Line contains a tab character. | 105 |
| Line has trailing spaces. | 106 |
| Line contains a tab character. | 106 |
| Line contains a tab character. | 107 |
| Line contains a tab character. | 108 |
| 'if' construct must use '{}'s. | 109 |
| Line contains a tab character. | 109 |
| Line has trailing spaces. | 110 |
| Line contains a tab character. | 110 |
| Line is longer than 80 characters (found 106). | 111 |
| Line contains a tab character. | 111 |
| Line contains a tab character. | 112 |
| Line is longer than 80 characters (found 85). | 113 |
| Line contains a tab character. | 113 |
| Line contains a tab character. | 114 |
| '{' is not preceded with whitespace. | 114 |
| Line contains a tab character. | 115 |
| Line contains a tab character. | 116 |
| Line contains a tab character. | 117 |
| Line contains a tab character. | 118 |
| '{' is not preceded with whitespace. | 118 |
| Line is longer than 80 characters (found 108). | 119 |
| Line contains a tab character. | 119 |
| Line contains a tab character. | 120 |
| Line contains a tab character. | 121 |
| Line contains a tab character. | 122 |
| Line contains a tab character. | 123 |
| Line has trailing spaces. | 124 |
| Line contains a tab character. | 124 |
| Line is longer than 80 characters (found 99). | 125 |
| Line contains a tab character. | 125 |
| Line contains a tab character. | 126 |
| Line is longer than 80 characters (found 262). | 127 |
| 'if' construct must use '{}'s. | 128 |
| Line contains a tab character. | 128 |
| Line has trailing spaces. | 130 |
| Line contains a tab character. | 130 |
| Line contains a tab character. | 131 |
| Line contains a tab character. | 132 |
| Line contains a tab character. | 133 |
| Line contains a tab character. | 134 |
| '{' is not preceded with whitespace. | 134 |
| Line contains a tab character. | 135 |
| Line is longer than 80 characters (found 96). | 136 |
| Line contains a tab character. | 136 |
| Line contains a tab character. | 137 |
| Line contains a tab character. | 138 |
| Line has trailing spaces. | 139 |
| Line contains a tab character. | 139 |
| Line contains a tab character. | 140 |
| Line contains a tab character. | 141 |
| Line contains a tab character. | 142 |
| Line contains a tab character. | 143 |
| '{' is not preceded with whitespace. | 143 |
| Line contains a tab character. | 144 |
| Line is longer than 80 characters (found 96). | 145 |
| Line contains a tab character. | 145 |
| Line contains a tab character. | 146 |
| Line contains a tab character. | 147 |
| Line has trailing spaces. | 148 |
| Line contains a tab character. | 148 |
| Line contains a tab character. | 149 |
| Line contains a tab character. | 150 |
| Line has trailing spaces. | 151 |
| Line contains a tab character. | 151 |
| Line is longer than 80 characters (found 81). | 152 |
| Line contains a tab character. | 152 |
| Missing a Javadoc comment. | 152 |
| Parameter dbName should be final. | 152 |
| '{' is not preceded with whitespace. | 152 |
| Line contains a tab character. | 153 |
| Line contains a tab character. | 154 |
| Line contains a tab character. | 155 |
| Line contains a tab character. | 156 |
| Line is longer than 80 characters (found 106). | 157 |
| Line contains a tab character. | 157 |
| Line contains a tab character. | 158 |
| Line contains a tab character. | 159 |
| Line contains a tab character. | 160 |
| Violation | Message | Line |
|---|---|---|
| Utility classes should not have a public or default constructor. | 28 |
| Line has trailing spaces. | 29 |
| Line contains a tab character. | 29 |
| Line has trailing spaces. | 30 |
| Line is longer than 80 characters (found 212). | 30 |
| Missing a Javadoc comment. | 30 |
| Line has trailing spaces. | 31 |
| Line has trailing spaces. | 33 |
| Line is longer than 80 characters (found 210). | 33 |
| Line has trailing spaces. | 39 |
| Line is longer than 80 characters (found 210). | 39 |
| Line has trailing spaces. | 41 |
| Line is longer than 80 characters (found 210). | 41 |
| Parameter args should be final. | 41 |
| Array brackets at illegal position. | 41 |
| '{' is not preceded with whitespace. | 41 |
| Line has trailing spaces. | 42 |
| Line has trailing spaces. | 44 |
| Line is longer than 80 characters (found 210). | 44 |
| Line has trailing spaces. | 46 |
| Line is longer than 80 characters (found 210). | 46 |
| Line has trailing spaces. | 47 |
| Line has trailing spaces. | 54 |
| Line is longer than 80 characters (found 210). | 54 |
| Line has trailing spaces. | 57 |
| '{' is not preceded with whitespace. | 57 |
| Line has trailing spaces. | 58 |
| Line is longer than 80 characters (found 210). | 58 |
| 'if' construct must use '{}'s. | 60 |
| Line has trailing spaces. | 60 |
| Line is longer than 80 characters (found 210). | 60 |
| Line has trailing spaces. | 64 |
| Line is longer than 80 characters (found 210). | 64 |
| Missing a Javadoc comment. | 64 |
| Parameter context should be final. | 64 |
| Parameter format should be final. | 64 |
| Parameter outputDir should be final. | 64 |
| Line has trailing spaces. | 66 |
| Line has trailing spaces. | 70 |
| Line is longer than 80 characters (found 210). | 70 |
| Line has trailing spaces. | 73 |
| Line is longer than 80 characters (found 210). | 73 |
| Line has trailing spaces. | 75 |
| Line has trailing spaces. | 76 |
| Line is longer than 80 characters (found 210). | 76 |
| Line has trailing spaces. | 80 |
| Line is longer than 80 characters (found 212). | 80 |
| Line has trailing spaces. | 81 |
| Line has trailing spaces. | 85 |
| Line has trailing spaces. | 86 |
| Line is longer than 80 characters (found 210). | 86 |
| 'if' construct must use '{}'s. | 88 |
| Line has trailing spaces. | 88 |
| Line is longer than 80 characters (found 210). | 88 |
| Violation | Message | Line |
|---|---|---|
| File does not end with a newline. | 0 |
| Missing a Javadoc comment. | 3 |
| Line has trailing spaces. | 4 |
| Line contains a tab character. | 4 |
| Line contains a tab character. | 5 |
| Missing a Javadoc comment. | 5 |
| Line contains a tab character. | 6 |
| Missing a Javadoc comment. | 6 |
| Line has trailing spaces. | 7 |
| Line contains a tab character. | 7 |
| Line contains a tab character. | 8 |
| Missing a Javadoc comment. | 8 |
| Parameter total should be final. | 8 |
| 'total' hides a field. | 8 |
| Parameter distinct should be final. | 8 |
| 'distinct' hides a field. | 8 |
| Line contains a tab character. | 9 |
| Line contains a tab character. | 10 |
| Line contains a tab character. | 11 |
| Line has trailing spaces. | 12 |
| Line contains a tab character. | 12 |
| Line contains a tab character. | 13 |
| Method 'getTotal' is not designed for extension - needs to be abstract, final or empty. | 13 |
| Missing a Javadoc comment. | 13 |
| Line contains a tab character. | 14 |
| Line contains a tab character. | 15 |
| Line has trailing spaces. | 16 |
| Line contains a tab character. | 16 |
| Line contains a tab character. | 17 |
| Method 'getDistinct' is not designed for extension - needs to be abstract, final or empty. | 17 |
| Missing a Javadoc comment. | 17 |
| Line contains a tab character. | 18 |
| Line contains a tab character. | 19 |
| Line has trailing spaces. | 20 |
| Line contains a tab character. | 20 |
